JoshuaTian/ChAMP: Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC
The package includes quality control metrics, a selection of normalization methods and novel methods to identify differentially methylated regions and to highlight copy number alterations.
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Package details |
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| Author | Yuan Tian [cre,aut], Tiffany Morris [ctb], Lee Stirling [ctb], Andrew Feber [ctb], Andrew Teschendorff [ctb], Ankur Chakravarthy [ctb] |
| Bioconductor views | CopyNumber DNAMethylation MethylationArray Microarray Normalization TwoChannel |
| Maintainer | Yuan Tian <champ450k@gmail.com> |
| License | GPL-3 |
| Version | 2.29.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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