README.md

In KCCG/TxDb.Hsapiens.UCSC.hg19.ccdsGene: Annotation package for TxDb object(s)

This is an R package, which contains a TxDB representing CCDS (Consensus CDS) transcripts. This is intended to be used similarly to the official BioConductor package TxDb.Hsapiens.UCSC.hg19.knownGene.

library(TxDb.Hsapiens.UCSC.hg19.ccdsGene) TxDb.Hsapiens.UCSC.hg19.ccdsGene TxDb object: # Db type: TxDb # Supporting package: GenomicFeatures # Data source: UCSC # Genome: hg19 # Organism: Homo sapiens # UCSC Table: ccdsGene # Resource URL: http://genome.ucsc.edu/ # Type of Gene ID: no gene ids # Full dataset: yes # miRBase build ID: NA # transcript_nrow: 28856 # exon_nrow: 192900 # cds_nrow: 192900 # Db created by: GenomicFeatures package from Bioconductor # Creation time: 2015-09-03 11:29:23 +1000 (Thu, 03 Sep 2015) # GenomicFeatures version at creation time: 1.20.3 # RSQLite version at creation time: 1.0.0 # DBSCHEMAVERSION: 1.1

KCCG/TxDb.Hsapiens.UCSC.hg19.ccdsGene documentation built on May 7, 2019, 12:05 p.m.