package: Annotation package for TxDb object(s)

Description Note Author(s) See Also Examples

Description

This package loads one or more TxDb objects. Such TxDb objects are an R interface to prefabricated databases contained by this package.

The names of any objects exposed by this package indicate the origin and resources exposed. So for example TxDb.Hsapiens.UCSC.hg19.knownGene would be a TxDb object, of Homo sapiens data from UCSC build hg19 based on the knownGene Track.

Note

This data package was made from resources at UCSC on 2015-09-03 11:29:23 +1000 (Thu, 03 Sep 2015) and based on the hg19 genome based on the ccdsGene table

Author(s)

Mark Cowley <m.cowley@garvan.org.au>

See Also

transcripts, transcriptsBy

Examples

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## load the library
library(TxDb.Hsapiens.UCSC.hg19.ccdsGene)
## list the contents that are loaded into memory
ls('package:TxDb.Hsapiens.UCSC.hg19.ccdsGene')
## show the db object that is loaded by calling it's name
TxDb.Hsapiens.UCSC.hg19.ccdsGene

KCCG/TxDb.Hsapiens.UCSC.hg19.ccdsGene documentation built on May 7, 2019, 12:05 p.m.