Man pages for KaiAragaki/amplify
Automate PCR Tasks Reproducibly
| dummy_rna_conc | Example data of RNA samples with concentrations |
| find_mean | Find mean of ct without putative outlier |
| find_outliers | Mark outliers and determine means and standard deviation... |
| get_best_factor | Calculate a sensible dilution factor |
| get_sample_names | Get or make sample names |
| pcr_calc_slope | Recalcuate standard slope of quantity vs Ct |
| pcr_control | Calculate Delta Ct mean based on given control probe |
| pcr_lib_calc | Calculate library PCR concentrations |
| pcr_lib_qc | Create library prep quality control data |
| pcr_lib_qc_plot_conc | Plot concentration of libraries across samples |
| pcr_lib_qc_plot_dil | Plot standard dilutions compared to a perfect dilution |
| pcr_lib_qc_plot_outliers | Plot mean centered samples without putative outliers |
| pcr_lib_qc_plot_slope | Plot the log of library quantities vs Ct |
| pcr_lib_qc_report | Generate visual library prep pcr quality control report |
| pcr_plan | Plan PCR experiment |
| pcr_plan_report | Create a report from a PCR plan |
| pcr_plate_view | View sample plating layout |
| pcr_plot | Plot qPCR results |
| pcr_rq | Recalculate relative quantities for a given experiment |
| reexports | Objects exported from other packages |
