Files in Kaleido-Biosciences/phgrofit
Extracting Physiological Data From Kinetic OD600 and pH Curves
.DS_Store
.Rbuildignore
.github/.gitignore
.github/workflows/check-release.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
Old_functions/.DS_Store
Old_functions/Helper_functions.R
Old_functions/grofit.R
Old_functions/model_fit_check.R
Old_functions/phgrofit.R
R/.DS_Store
R/PCA.R
R/avg_phgrofit.R
R/avg_phgropro.R
R/combined_dendro_plot.R
R/dendrospect.R
R/dendrospect_kinetic.R
R/dendrospect_model.R
R/flag.R
R/graph_check.R
R/grofit.R
R/gropro.R
R/heatmapper.R
R/model_fit_check.R
R/od600_features.R
R/pH_features.R
R/phgrofit.R
R/phgropro.R
R/scale_phgrofit.R
R/utils-pipe.R
README.Rmd
README.md
biotek_plate_reader_protocols/BCECF_pH_Kinetic_384_Sweep.prt
biotek_plate_reader_protocols/BCECF_pH_Kinetic_96_Sweep_Shake.prt
images/.DS_Store
images/grofit_heatmap.png
images/phgrofit_heatmap.png
man/.DS_Store
man/PCA.Rd
man/avg_phgrofit.Rd
man/avg_phgropro.Rd
man/combined_dendro_plot.Rd
man/dendrospect.Rd
man/dendrospect_kinetic.Rd
man/dendrospect_model.Rd
man/figures/README-unnamed-chunk-10-1.png
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man/figures/phgrofit_example.png
man/flag.Rd
man/graph_check.Rd
man/grofit.Rd
man/gropro.Rd
man/heatmapper.Rd
man/model_fit_check.Rd
man/od600_features.Rd
man/pH_features.Rd
man/phgrofit.Rd
man/phgropro.Rd
man/pipe.Rd
man/scale_phgrofit.Rd
phgrofit.Rproj
tests/.DS_Store
tests/testdata/.DS_Store
tests/testdata/phgrofit_test_metadata.csv
tests/testdata/phgrofit_test_raw_data.txt
