FillClosestS: FillClosestS

In KamilSJaron/ConjunctionStats: The parser of simulations of hybrid zones performed by simulator Conjunction (http://github.com/KamilSJaron/Conjunction)

Description

FillClosestS is a function that finds effective selection (ss) for each multilocus cline in the input data.frame. ss is a selection acting on onelocus cline that is needed to maintaing cline of the same width.

Usage

FillClosestS(multilocus, onelocus)

Arguments

multilocus	a multilocus data frame filled by FillSettingByHZAR
onelocus	a onelocus data frame filled by FillSettingByHZAR. selections used for onelocus simulation should cover whole possible range (0.01 to 0.99)

Value

A data.frame object (multilocus) with new column ss;

Author(s)

Kamil Jaron kamiljaron at gmail.com

Examples

{
   # load data
   multilocus_sim = ReadSummary('multilocus_sim.out')
   ml_GradTable = ReadSetting('multilocus_setting.txt')
   ml_GradTable = FillSetting(multilocus_sim, ml_GradTable)
   onelocus_sim = ReadSummary('onelocus_sim.out')
   onelocus_GradTable = ReadSetting('multilocus_setting.txt')
   onelocus_GradTable = FillSetting(onelocus_sim, onelocus_GradTable)

   # compute ss
   myGradTable = FillClosestS(ml_GradTable, onelocus_GradTable)
}

KamilSJaron/ConjunctionStats documentation built on May 7, 2019, 12:06 p.m.