Kange2014/dGSMEF: A dynamic genome-scale modelling of E. coli fermentation
Version 0.0.0.9000

A dynamic genome-scale modelling of E. coli fermentation including batch, fed-batch and induction phases for recombinant protein expression. It's implemented with static optimization approach (SOA). First, the simulation time is divided into small periods which are assumed to be in quasi-steady state; Second, for every time step, an flux balance analysis (FBA) problem is solved and the fluxes are integrated over the time period and extracellular concentrations are calculated, accordingly.

Getting started

Package details

Maintainer
LicenseGPL-2
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Kange2014/dGSMEF")
Kange2014/dGSMEF documentation built on July 19, 2017, 3:47 p.m.