Man pages for KarimOualkacha/PCH4Pedigees
Principal Components of Heritability for High Dimension Quantitative Traits and General Pedigrees
| ANOVA.data | Transform pedigree data to a list format |
| ANOVA.estimators | Variance components estimators |
| ANOVA.estimators.COV | Variance components estimates in the presence of covariates |
| bdiag | Convert a list of matrices to one block diagonal matrix |
| Coeff.beta.GLS | Generalized Least Squares estimators of the covaraite effects |
| CV.lambda.Wang | Cross validation techniques for regularisation parameter |
| Data.Without.miss | Get Pedigree data without missing values |
| DESIGN.Matrix.X | Get the model design matrix |
| Family.sizes | Get family sizes from the pedigree file |
| kin.data | Get kinship matrix |
| kin.data.miss | Get kinship matrix for missing data |
| PCH4GeneralPed | ANOVA Estimators of Principal Components of Heritability |
| PCH4GeneralPed-package | PCH4GeneralPed: R package for the calculation of principal... |
| PCH.Mment | Principal components of heritability |
| Ped.with.COVs | Pedigree file with covariates |
| Ped.without.COVs | Pedigree file without covariates |
| solvebeta | Generalized eigensystem problem |
| Y.cov | Get all traits as one vector |
