kin.data.miss: Get kinship matrix for missing data

In KarimOualkacha/PCH4Pedigees: Principal Components of Heritability for High Dimension Quantitative Traits and General Pedigrees

Description

This function calculates the kinship matrix from a pedigree file in the presence of missing data.

Usage

kin.data.miss(ntype, Ped)

Arguments

ntype	Vector of integers. Its length equals to the total number of families used in the pedigree file. The ntype's entries are the total number of subjects within each family.
Ped	Pedigree file with the first 5 columns should be in the following order: family IDs, subject IDs, father IDs, mother IDs and sex. If there are covariates in the model, they should be introduced after the five standard columns in the pedigree file followed by the quantitative traits.

Value

List of matrices. Its length equals to the total number of families. The list entries represent the family kinship matrices.

Author(s)

Karim Oualkacha

See Also

Family.sizes, kin.data

KarimOualkacha/PCH4Pedigees documentation built on May 20, 2019, 8:30 a.m.