|mmexpand_network||Find connections of a subset of scaffolds in a larger set of...|
|mmexport||Export DNA sequences of selected scaffolds|
|mmextract||Extract all scaffolds within a selection polygon|
|mmload||Load and combine data for use with other mmgenome2 functions|
|mmlocator||Locate points in a ggplot2 plot|
|mmmerge||Merge mm object with more data|
|mmmerge_linkfiles||Load and merge files with mate-pair or paired-end connection...|
|mmnetwork||Network plot of mate-pair or paired-end connected scaffold...|
|mmplot||Visualise metagenomes in various ways|
|mmplot_cov_profiles||Compare coverage profiles|
|mmplot_pairs||Plot multiple combinations of variables in a pairs plot|
|mmscanbins||Retrieve scaffold names from all genome bins in a folder|
|mmstats||Print basic statistics of metagenome data|
|print.ggplot||Custom ggplot object print to suppress warnings|
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