syn_mod_pvalues: Synovial differential expression of modules across pathotypes...
In KatrionaGoldmann/volcano3Ddata: Data for Interactive Plotting of Three-Way Differential Expression Analysis
Description
Usage
Format
Source
Description
A dataset containing the relative differential expression parameters
comparing module expression between different pathotype groups for 81
synovial biopsies from the PEAC cohort.
Usage
1
Format
A data frame with 346 rows representing modules and 10 columns for
each statistical parameter:
- Module
The gene name
- Lymphoid-Fibroid p.value
pvalue from lymphoid vs fibroid
comparison
- Lymphoid-Fibroid q.value
adjusted pvalue from lymphoid vs
fibroid comparison
- Lymphoid-Fibroid logFC
logarithmic fold change from lymphoid vs
fibroid comparison
- Lymphoid-Myeloid p.value
pvalue from lymphoid vs myeloid
comparison
- Lymphoid-Myeloid q.value
adjusted pvalue from lymphoid vs
myeloid comparison
- Lymphoid-Myeloid logFC
logarithmic fold change from lymphoid vs
myeloid comparison
- Myeloid-Fibroid p.value
pvalue from myeloid vs fibroid
comparison
- Myeloid-Fibroid q.value
adjusted pvalue from myeloid vs fibroid
comparison
- Myeloid-Fibroid logFC
logarithmic fold change from myeloid vs
fibroid comparison
Source
https://www.cell.com/cell-reports/fulltext/S2211-1247(19)31007-1
KatrionaGoldmann/volcano3Ddata documentation built on May 27, 2020, 12:10 a.m.
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Description Usage Format Source
Description
A dataset containing the relative differential expression parameters comparing module expression between different pathotype groups for 81 synovial biopsies from the PEAC cohort.
Usage
1 |
Format
A data frame with 346 rows representing modules and 10 columns for each statistical parameter:
- Module
The gene name
- Lymphoid-Fibroid p.value
pvalue from lymphoid vs fibroid comparison
- Lymphoid-Fibroid q.value
adjusted pvalue from lymphoid vs fibroid comparison
- Lymphoid-Fibroid logFC
logarithmic fold change from lymphoid vs fibroid comparison
- Lymphoid-Myeloid p.value
pvalue from lymphoid vs myeloid comparison
- Lymphoid-Myeloid q.value
adjusted pvalue from lymphoid vs myeloid comparison
- Lymphoid-Myeloid logFC
logarithmic fold change from lymphoid vs myeloid comparison
- Myeloid-Fibroid p.value
pvalue from myeloid vs fibroid comparison
- Myeloid-Fibroid q.value
adjusted pvalue from myeloid vs fibroid comparison
- Myeloid-Fibroid logFC
logarithmic fold change from myeloid vs fibroid comparison
Source
https://www.cell.com/cell-reports/fulltext/S2211-1247(19)31007-1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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