print-sceptre_object-method: Print

In Katsevich-Lab/sceptre: Analysis of Single-Cell CRISPR Screen Data

Print

Description

print() prints information about the dataset and the status of the analysis to the console. The output contains several fields: Attributes of the data (summarizing key features of the data), Analysis status (indicating the analysis functions that have been called), Analysis parameters (summarizing the analysis parameters set in set_analysis_parameters()), gRNA-to-cell assignment information (summarizing the outcome of the gRNA-to-cell assignment step), and Summary of results (summarizing the key analysis results). A subset of these fields may be printed, depending on the status of the analysis.

Usage

## S4 method for signature 'sceptre_object'
print(x)

Arguments

x	a sceptre_object

Value

the value NULL

Examples

library(sceptredata)
data(highmoi_example_data)
data(grna_target_data_frame_highmoi)
# import data
sceptre_object <- import_data(
  response_matrix = highmoi_example_data$response_matrix,
  grna_matrix = highmoi_example_data$grna_matrix,
  grna_target_data_frame = grna_target_data_frame_highmoi,
  moi = "high",
  extra_covariates = highmoi_example_data$extra_covariates,
  response_names = highmoi_example_data$gene_names
)
print(sceptre_object)

Katsevich-Lab/sceptre documentation built on May 1, 2024, 10:40 p.m.