metabolites: MIDAS Metabolites

In KevinGHicks/MIDAS: MIDAS

MIDAS Metabolites

Description

Metabolite metadata matching MIDAS measurements. Some measurements include multiple ambiguous compounds.

Usage

metabolites

Format

A tibble with 400 rows and 8 columns:

metabolite

Metabolite name (indistinguishable metabolites are lumped) matching midas_pmis

metabolite_component

A unique metabolite constituent of the metabolite

MIDAS_ID

metabolite_component's internal identifier

Pool

Metabolite pool metabolite/metabolite_component were run in

KEGG_ID

metabolite_component's KEGG identifier

HMDB_ID

metabolite_component's HMDB identifier

SMILES

metabolite_component's isomeric SMILES encoding structure

KEGG_pathway_association

metabolite_component's KEGG pathways

KevinGHicks/MIDAS documentation built on May 12, 2022, 8:14 a.m.