node.depth.evonet: Depth of Nodes
In KlausVigo/ggnetworx: Visualization of Phylogenetic Networks
Description
Usage
Arguments
Value
See Also
Examples
Description
These functions return the depths or heights of nodes and tips.
Usage
1
node.depth.evonet(x, ...)
Arguments
x
an object of class "evonet"
...
Further arguments passed to or from other methods.
Value
a vector with the depth of the nodes
See Also
Examples
1
2
3
4
5
z <- ape::read.evonet(text = "((1,((2,(3,(4)Y#H1)g)e,
(((Y#H1, 5)h,6)f)X#H2)c)a,((X#H2,7)d,8)b)r;")
nd <- node.depth.evonet(z)
z$edge.length <- nd[z$edge[,1]] - nd[z$edge[,2]]
ggevonet(z)
KlausVigo/ggnetworx documentation built on Nov. 20, 2019, 6:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also Examples
Description
These functions return the depths or heights of nodes and tips.
Usage
1 | node.depth.evonet(x, ...)
|
Arguments
x |
an object of class "evonet" |
... |
Further arguments passed to or from other methods. |
Value
a vector with the depth of the nodes
See Also
Examples
1 2 3 4 5 | z <- ape::read.evonet(text = "((1,((2,(3,(4)Y#H1)g)e,
(((Y#H1, 5)h,6)f)X#H2)c)a,((X#H2,7)d,8)b)r;")
nd <- node.depth.evonet(z)
z$edge.length <- nd[z$edge[,1]] - nd[z$edge[,2]]
ggevonet(z)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.