node.depth.evonet: Depth of Nodes

In KlausVigo/ggnetworx: Visualization of Phylogenetic Networks

Depth of Nodes

Description

These functions return the depths or heights of nodes and tips.

Usage

node.depth.evonet(x, ...)

Arguments

x	an object of class "evonet"
...	Further arguments passed to or from other methods.

Value

a vector with the depth of the nodes

See Also

node.depth

Examples

z <- ape::read.evonet(text = "((1,((2,(3,(4)Y#H1)g)e,
(((Y#H1, 5)h,6)f)X#H2)c)a,((X#H2,7)d,8)b)r;")
nd <- node.depth.evonet(z)
z$edge.length <- nd[z$edge[,1]] - nd[z$edge[,2]]
ggevonet(z)

KlausVigo/ggnetworx documentation built on Dec. 25, 2024, 2:38 a.m.