Description Usage Arguments Value See Also
Remove peak mappings that were problematic (unidentified, missing, or ambiguous) during peak mapping.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 | iso_remove_problematic_peak_mappings(...)
## S3 method for class 'iso_file_list'
iso_remove_problematic_peak_mappings(
iso_files,
remove_unidentified = TRUE,
remove_missing = TRUE,
remove_ambiguous = TRUE,
remove_mapping_info_columns = TRUE,
quiet = default(quiet)
)
## S3 method for class 'data.frame'
iso_remove_problematic_peak_mappings(
peak_table,
remove_unidentified = TRUE,
remove_missing = TRUE,
remove_ambiguous = TRUE,
remove_mapping_info_columns = TRUE,
quiet = default(quiet)
)
|
... |
S3 method placeholder parameters, see class specific functions for details on parameters |
iso_files |
collection of continuous flow iso_file objects |
quiet |
whether to display (quiet=FALSE) or silence (quiet = TRUE) information messages. Set parameter to overwrite global defaults for this function or set global defaults with calls to iso_turn_info_message_on and iso_turn_info_message_off |
peak_table |
data frame with mapped peaks. Requires the |
remove_mapping_info_column |
whether to automatically remove mapping info columns. If true and:
|
the data with the problematic peak mappings remove
Other peak mapping functions:
iso_get_problematic_peaks()
,
iso_map_peaks()
,
iso_summarize_peak_mappings()
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