dbscan_SH: dbscan_SH

Description Usage Arguments Value

Description

DBSCAN with silhouette score optimization

Usage

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dbscan_SH(data, eps = NULL, showplot = F, prop_outliers = 0.1,
  eps_res = 500, eps_range = NULL)

Arguments

data

$Y of Rtsne output

showplot

Logical. TRUE to plot silhouette score and eps. Default is FALSE.

prop_outliers

A value between 0 to 1. The proportion of data points allowed to be unclustered. Default is 0.1.

eps_res

Integer. The resolution of simulation. Default is 500.

eps_range

NULL or vectore of two values. The space of search for eps parameter. If a vectore is given, simulation is performed between the given range. Otherwise, te serch space is defined based on input data size.

Value

A vector of cluster label. 0 is for outlyers.


Kyoko-wtnb/meRedith documentation built on May 8, 2019, 5:40 p.m.