LTLA/GenomicInteractions: Classes and Methods for Handling Genomic Interaction Data
Provides the GenomicInteractions class for handling genomic interaction data such as ChIA-PET and Hi-C data. Also provides methods for common manipulations and queries such as discovery of overlaps in one and two dimensions, calculation of bounding boxes, creation of contact matrices and examination of interaction tracks.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DataImport DataRepresentation HiC Infrastructure Software |
| Maintainer | |
| License | GPL-3 |
| Version | 1.99.2 |
| URL | https://github.com/LTLA/GenomicInteractions |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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