Man pages for LXQin/EquiNorm
Normalize expression data using equivalently expressed genes
| data.simulated | A list containing simulated datasets. |
| data.x | A vector indicating group (e.g. disease status) for each... |
| data.y | An array of gene expression data. |
| equi.gene.norm | Normalize expression data using equivalently expressed genes |
| EquiNorm-internal | Internal EquiNorm Functions |
| EquiNorm-package | Normalize expression data using equivalently expressed genes |
| est.hat | List containing the estimates from the hierarchical mixture... |
| lambda.start | Starting value for proportion of over-expressed genes. |
| lemma.maxIts | Maximum number of iterations for lemma. |
| lemma.outdir | Directory for lemma output. |
| lemma.plots | A logical value indicating whether lemma should generate... |
| lemma.tol | Tolerance for lemma convergence. |
| maxIter | Maximum number of iterations for EquiNorm. |
| pi.start | Starting value for proportion of differentially expressed... |
| tolerance | Tolerance for EquiNorm convergence. |
