Normalize expression data using equivalently expressed genes

data.simulated | A list containing simulated datasets. |

data.x | A vector indicating group (e.g. disease status) for each... |

data.y | An array of gene expression data. |

equi.gene.norm | Normalize expression data using equivalently expressed genes |

EquiNorm-internal | Internal EquiNorm Functions |

EquiNorm-package | Normalize expression data using equivalently expressed genes |

est.hat | List containing the estimates from the hierarchical mixture... |

lambda.start | Starting value for proportion of over-expressed genes. |

lemma.maxIts | Maximum number of iterations for lemma. |

lemma.outdir | Directory for lemma output. |

lemma.plots | A logical value indicating whether lemma should generate... |

lemma.tol | Tolerance for lemma convergence. |

maxIter | Maximum number of iterations for EquiNorm. |

pi.start | Starting value for proportion of differentially expressed... |

tolerance | Tolerance for EquiNorm convergence. |

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