Man pages for LXQin/EquiNorm
Normalize expression data using equivalently expressed genes

data.simulatedA list containing simulated datasets.
data.xA vector indicating group (e.g. disease status) for each...
data.yAn array of gene expression data.
equi.gene.normNormalize expression data using equivalently expressed genes
EquiNorm-internalInternal EquiNorm Functions
EquiNorm-packageNormalize expression data using equivalently expressed genes
est.hatList containing the estimates from the hierarchical mixture...
lambda.startStarting value for proportion of over-expressed genes.
lemma.maxItsMaximum number of iterations for lemma.
lemma.outdirDirectory for lemma output.
lemma.plotsA logical value indicating whether lemma should generate...
lemma.tolTolerance for lemma convergence.
maxIterMaximum number of iterations for EquiNorm.
pi.startStarting value for proportion of differentially expressed...
toleranceTolerance for EquiNorm convergence.
LXQin/EquiNorm documentation built on Jan. 2, 2018, 7:36 p.m.