LiNk-NY/TENxIO: Import methods for 10X Genomics files

Provides a structured S4 approach to importing data files from the 10X pipelines. It mainly supports Single Cell Multiome ATAC + Gene Expression data among other data types. The main Bioconductor data representations used are SingleCellExperiment and RaggedExperiment.

Getting started

Package details

Bioconductor views DataImport Infrastructure SingleCell Software
Maintainer
LicenseArtistic-2.0
Version1.9.2
URL https://github.com/waldronlab/TENxIO
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("LiNk-NY/TENxIO")
LiNk-NY/TENxIO documentation built on Nov. 16, 2024, 7:10 p.m.