NEWS.md
In LiNk-NY/TENxIO: Import methods for 10X Genomics files

Use rowData from filtered SingleCellExperiment object (@MalteThodberg, #5)
Add examples to TENxFileList documentation and improve constructor function

Skip unit tests when remote H5 access is not configured.

TENxTSV class has been added to handle compressed and uncompressed TSV files.

The import method for TENxFileList was returning a nested SummarizedExperiment within the SingleCellExperiment. The counts and assay(..., i="counts") methods should only return the bare Matrix rather than the embedded SummarizedExperiment (@dgastn, #2).

Package released in Bioconductor!

LiNk-NY/TENxIO documentation built on May 3, 2024, 11:08 p.m.

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