elnet.cv: Nested Cross-validation

In LidaWangPSU/PUMICE: (Prediction Using Models Informed by Chromatin conformations and Epigenomics

Nested Cross-validation

Description

Nested Cross-validation

Usage

elnet.cv(
  geno_training,
  expression_training,
  fold_training,
  geno_validating,
  expression_validating,
  geno_tuning,
  expression_tuning,
  fold_tuning,
  geno_testing,
  expression_testing,
  penalty_k
)

Arguments

expression_training	training expression set
fold_training	index for traning for fold
geno_validating	validating genotype set
expression_validating	validating expression set
geno_tuning	tuning genotype set
expression_tuning	tuning expression set
fold_tuning	index for tuning for fold
geno_testing	testing genotype set
expression_testing	testing expression set
penalty_k	penalty factor
geno_traning	training genotype set

Examples

elnet.cv()

LidaWangPSU/PUMICE documentation built on Oct. 9, 2022, 3:57 p.m.