Man pages for LieberInstitute/jaffelab
Commonly used functions by the Jaffe lab
| agePlotter | Age plotter |
| cleaningY | Regress out covariates |
| corner | corner, an improved head() |
| edge.pvalue | Function to compute empirical p-values |
| expression_cutoff | Find expression cutoffs |
| getF | Given two nested models, calculate the F-statistics |
| getOR | Calculate the odds ratio |
| getPcaVars | Calculates the percent of variance explained for principal... |
| getR2 | Calculate R squared from a matrix |
| getT | Get t-statistics from limma objects |
| googledrive_csv | Upload a CSV file to googledrive |
| granges_to_ucsc | Convert a GRanges object to UCSC coordinates |
| jaffelab-package | jaffelab: Commonly used functions by the Jaffe lab |
| junctionCount | Count junctions |
| lab_presenters | Randomize presenters and upload them to Google Drive |
| merge_rse_metrics | Merge sample metadata across several columns |
| n_functions | Get more than just the single max or single min value with... |
| split0 | Splits into a list |
| ss | Wrapper for string split and sapply |
| ucsc_to_granges | Convert UCSC coordinates to a GRanges object |
