granges_to_ucsc: Convert a GRanges object to UCSC coordinates
In LieberInstitute/jaffelab: Commonly used functions by the Jaffe lab
View source: R/ucsc_to_granges.R
granges_to_ucsc R Documentation
Convert a GRanges object to UCSC coordinates
Description
This function takes a GRanges objects and returns a string of UCSC genome
browser coordinates.
Usage
granges_to_ucsc(gr)
Arguments
gr
A GRanges object.
Value
A character vector of UCSC genome browser coordinates.
Author(s)
Leonardo Collado-Torres
See Also
ucsc_to_granges
Examples
ucsc_coords <- c("chr1:1000-2000")
granges_to_ucsc(ucsc_to_granges(ucsc_coords))
LieberInstitute/jaffelab documentation built on April 1, 2024, 7:26 a.m.
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View source: R/ucsc_to_granges.R
| granges_to_ucsc | R Documentation |
Convert a GRanges object to UCSC coordinates
Description
This function takes a GRanges objects and returns a string of UCSC genome browser coordinates.
Usage
granges_to_ucsc(gr)
Arguments
gr |
A GRanges object. |
Value
A character vector of UCSC genome browser coordinates.
Author(s)
Leonardo Collado-Torres
See Also
ucsc_to_granges
Examples
ucsc_coords <- c("chr1:1000-2000")
granges_to_ucsc(ucsc_to_granges(ucsc_coords))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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