Compute coverage matrices from recount
https://jhubiostatistics.shinyapps.io/recount/ using bwtool
.
This makes it easy to explore regions beyond the genes and exons that are
available in recount. For example, it can be used for
annotation-agnostic differential expression analyses with the data from the
recount project as described at
http://biorxiv.org/content/early/2016/08/08/068478.
Leonardo Collado-Torres <lcolladotor@gmail.com>
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