Files in LucaAnholt/PanViz

Integrating Multi-Omic Network Data With Summay-Level GWAS Data

.RData

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/GWAS_data_reader.R R/NCBI_clean_2_helper.R R/NCBI_clean_helper.R R/NCBI_dbSNP_query.R R/adj_list_to_igraph.R R/adjl_to_G.R R/adjl_to_G_grouped.R R/colour_IMON.R R/dbSNP_query_check_helper.R R/dbSNP_query_clean_helper.R R/decompose_IMON.R R/ego_IMON.R R/er_snp_vector.R R/get_IMON.R R/get_grouped_IMON.R R/globals.R R/multi_hex_col_mix.R R/reaction_cleanup_helper.R R/retry.R R/set_base_graph_attributes.R R/set_snp_grouping.R R/snp_gene_chr_match.R R/snp_gene_map.R

R/sysdata.rda

data/er_snp_vector.rda

inst/extdata/GWASCentralMart_ERplusBC.tsv

inst/extdata/gwas-association-downloaded_2021-09-13-EFO_1000649.tsv

inst/script/GWASCentralMart_ERplusBC_documentation.R inst/script/gwas-association-downloaded_2021-09-13-EFO_1000649_documentation.R

inst/testdata/testIMON.Rds

inst/testdata/testIMON_documentation

man/GWAS_data_reader.Rd man/NCBI_clean.Rd man/NCBI_clean_2.Rd man/NCBI_dbSNP_query.Rd man/adj_list_to_igraph.Rd man/adjl_to_G.Rd man/adjl_to_G_grouped.Rd man/colour_IMON.Rd man/dbSNP_query_check.Rd man/dbSNP_query_clean.Rd man/decompose_IMON.Rd man/ego_IMON.Rd man/er_snp_vector.Rd man/get_IMON.Rd man/get_grouped_IMON.Rd man/multi_hex_col_mix.Rd man/reaction_cleanup.Rd man/retry.Rd man/set_base_graph_attributes.Rd man/set_snp_grouping.Rd man/snp_gene_chr_match.Rd man/snp_gene_map.Rd tests/testthat.R tests/testthat/test_GWAS_data_reader.R tests/testthat/test_decompose_IMON.R tests/testthat/test_get_IMON.R tests/testthat/test_get_grouped_IMON.R

vignettes/.gitignore

vignettes/IMON_example.png

vignettes/IMON_method.png

vignettes/my-vignette.Rmd

vignettes/ref.bib

LucaAnholt/PanViz documentation built on April 17, 2022, 7:28 a.m.