plot.delta.Cq.box: plots delta Cq values as box-plots

In LucasFVoges/DoubleqpcR: DMAS-qPCR data analysis

plots delta Cq values as box-plots

Description

delta.Cq data frame has to be created before

Usage

plot.delta.Cq.box(
  points = TRUE,
  useModel = FALSE,
  predictionRange = seq(-8, 8, 2),
  reTransform = FALSE,
  pVal = FALSE,
  comparisons = list(c(1, 2))
)

Arguments

points	Show individual datapoints? std TRUE
useModel	Use the regression model for predicition.
predictionRange	this vector will be used for the prediction. corresponds to the deltaCq y axis!
reTransform	If the linear transformation (linSqrtTransform) was used set to TRUE
pVal	Plots the P value from stat_compare_means (ggpubr) to the plot
comparisons	a list of 2 item vectors to define which P values are presented.

Details

It is possible to use the regression model to display a prediction axis. It is also possible to plot the P Values for a t.test of the boxplots.

All these extra plot options can be manually done after returning the ggplot object for more customisation!

Value

returns a ggplot object.

LucasFVoges/DoubleqpcR documentation built on Feb. 19, 2024, 7:21 p.m.