testdata1: testdata1
In LyonsZhang/ProgPerm: Progressive permutation for a dynamic representation of the robustness of microbiome discoveries
Usage
1
data("testdata1")
Format
A data frame with 29 observations on the following 268 variables.
variablea factor with levels Africa Europe
Species.Prevotella_copria numeric vector
Species.Faecalibacterium_prausnitziia numeric vector
Species.Bacteroides_doreia numeric vector
Species.Bifidobacterium_unclassifieda numeric vector
Species.Bacteroides_unclassifieda numeric vector
Species.Eubacterium_rectalea numeric vector
Species.Prevotella_stercoreaa numeric vector
Species.Shigella_flexneria numeric vector
Species.Gemmiger_formicilisa numeric vector
Species.Bacteroides_vulgatusa numeric vector
Species.Streptococcus_unclassifieda numeric vector
Species.Bifidobacterium_longuma numeric vector
Species.Escherichia.Shigella_unclassifieda numeric vector
Species.Bifidobacterium_pseudocatenulatuma numeric vector
Species.Streptococcus_thermophilusa numeric vector
Species.Barnesiella_intestinihominisa numeric vector
Species.Lachnospiraceae_ge_unclassifieda numeric vector
Species.Haemophilus_parainfluenzaea numeric vector
Species.Bifidobacterium_adolescentisa numeric vector
Species.Clostridium_sensu_stricto_1_unclassifieda numeric vector
Species.Alistipes_onderdonkiia numeric vector
Species.Subdoligranulum_unclassa numeric vector
Species.Fusicatenibacter_saccharivoransa numeric vector
Species.Bacteroides_intestinalisa numeric vector
Species.Alistipes_unclassifieda numeric vector
Species.Ruminococcus_faecisa numeric vector
Species.Christensenellaceae_R.7_group_unclassa numeric vector
Species.Roseburia_intestinalisa numeric vector
Species.Prevotellaceae_unclassifieda numeric vector
Species.Alistipes_putredinisa numeric vector
Species.Subdoligranulum_unclassifieda numeric vector
Species.Lachnospiraceae_NK4A136_group_unclassa numeric vector
Species.Dorea_formicigeneransa numeric vector
Species..Ruminococcus._gnavusa numeric vector
Species.Klebsiella_pneumoniaea numeric vector
Species.Roseburia_unclassifieda numeric vector
Species.Prevotella_1_unclassifieda numeric vector
Species.Succinivibrio_unclassa numeric vector
Species.Roseburia_faecisa numeric vector
Species.Blautia_unclassa numeric vector
Species.Rhodospirillaceae_unclassa numeric vector
Species.Prevotella_9_unclassa numeric vector
Species.Bacteroides_fragilisa numeric vector
Species.Ruminobacter_unclassa numeric vector
Species.Parabacteroides_distasonisa numeric vector
Species.Ruminococcus_2_unclassa numeric vector
Species.Ruminococcaceae_UCG.002_unclassa numeric vector
Species.Enterobacteriaceae_unclassifieda numeric vector
Species.Ruminococcaceae_UCG.013_unclassa numeric vector
Species.Ruminococcaceae_UCG.005_unclassa numeric vector
Species.Dialister_succinatiphilusa numeric vector
Species.Bacteroides_thetaiotaomicrona numeric vector
Species.Bacteroides_unclassa numeric vector
Species.Saccharibacteria_ge_unclassa numeric vector
Species.Blautia_lutia numeric vector
Species.Bacteroides_ovatusa numeric vector
Species.Ruminococcaceae_UCG.014_unclassa numeric vector
Species.Ruminococcus_1_unclassa numeric vector
Species.Lachnoclostridium_unclassa numeric vector
Species.Dorea_unclassifieda numeric vector
Species.Dialister_invisusa numeric vector
Species.Bacteroides_caccaea numeric vector
Species.Roseburia_inulinivoransa numeric vector
Species.Bifidobacterium_bifiduma numeric vector
Species.Bifidobacterium_brevea numeric vector
Species.Prevotella_1_unclassa numeric vector
Species.Treponema_2_unclassifieda numeric vector
Species.Odoribacter_splanchnicusa numeric vector
Species.Ruminococcus_lactarisa numeric vector
Species.Alistipes_finegoldiia numeric vector
Species.Lactobacillus_rogosaea numeric vector
Species.Blautia_unclassifieda numeric vector
Species.Bilophila_unclassa numeric vector
Species.Alistipes_ihumiia numeric vector
Species.Parabacteroides_johnsoniia numeric vector
Species.Butyrivibrio_crossotusa numeric vector
Species.Bacteroides_xylanisolvensa numeric vector
Species.Lachnospiraceae_UCG.004_unclassa numeric vector
Species.Clostridium_saudiia numeric vector
Species.Parasutterella_excrementihominisa numeric vector
Species.Prevotellaceae_unclassa numeric vector
Species.Drancourtella_massiliensisa numeric vector
Species.Clostridium_perfringensa numeric vector
Species.Parabacteroides_merdaea numeric vector
Species.Alloprevotella_unclassa numeric vector
Species.Lachnospiraceae_unclassifieda numeric vector
Species.Clostridiales_vadinBB60_group_ge_unclassa numeric vector
Species.Treponema_2_unclassa numeric vector
Species.Blautia_wexleraea numeric vector
Species.Ruminococcus_2_unclassifieda numeric vector
Species.Peptostreptococcaceae_unclassifieda numeric vector
Species.Lachnospiraceae_UCG.003_unclassa numeric vector
Species.Sutterella_wadsworthensisa numeric vector
Species.Coprococcus_comesa numeric vector
Species.Ruminococcaceae_unclassa numeric vector
Species.Alistipes_obesia numeric vector
Species.Porphyromonadaceae_unclassa numeric vector
Species.Enterobacter_cloacaea numeric vector
Species.Prevotellaceae_NK3B31_group_unclassa numeric vector
Species..Ruminococcus._obeuma numeric vector
Species.Lactobacillus_unclassifieda numeric vector
Species.Weissella_confusaa numeric vector
Species.Faecalibacterium_unclassifieda numeric vector
Species.Lactobacillus_fermentuma numeric vector
Species.Roseburia_unclassa numeric vector
Species.Coprobacter_fastidiosusa numeric vector
Species.Lachnospiraceae_ge_unclassa numeric vector
Species.Ruminococcus_callidusa numeric vector
Species.Lachnospiraceae_NK3A20_group_unclassa numeric vector
Species.Prevotella_7_unclassa numeric vector
Species.Prevotella_9_unclassifieda numeric vector
Species.Ruminococcaceae_ge_unclassa numeric vector
Species.Alistipes_shahiia numeric vector
Species.Lachnospira_pectinoschizaa numeric vector
Species.Sarcina_unclassifieda numeric vector
Species.Anaerostipes_hadrusa numeric vector
Species.Lactobacillus_ruminisa numeric vector
Species.Gabonia_massiliensisa numeric vector
Species..Ruminococcus._torquesa numeric vector
Species.Clostridiales_unclassifieda numeric vector
Species.Prevotella_2_unclassifieda numeric vector
Species.Dorea_unclassa numeric vector
Species.NB1.n_ge_unclassa numeric vector
Species.Lachnospiraceae_ND3007_group_unclassa numeric vector
Species..Eubacterium._siraeuma numeric vector
Species.Ruminococcaceae_unclassifieda numeric vector
Species.Alistipes_unclassa numeric vector
Species.Ruminococcaceae_UCG.003_unclassa numeric vector
Species..Eubacterium._eligensa numeric vector
Species.Desulfovibrio_unclassa numeric vector
Species.Lachnospiraceae_unclassa numeric vector
Species.Flavonifractor_plautiia numeric vector
Species.Butyricimonas_virosaa numeric vector
Species.Coprococcus_1_unclassa numeric vector
Genus.Prevotella_9a numeric vector
Genus.Faecalibacteriuma numeric vector
Genus.Bacteroidesa numeric vector
Genus.Bifidobacteriuma numeric vector
Genus.Lachnospiraceae_gea numeric vector
Genus.Prevotella_2a numeric vector
Genus.Escherichia.Shigellaa numeric vector
Genus.Subdoligranuluma numeric vector
Genus.Streptococcusa numeric vector
Genus.Barnesiellaa numeric vector
Genus.Haemophilusa numeric vector
Genus.Clostridium_sensu_stricto_1a numeric vector
Genus.Alistipesa numeric vector
Genus.Fusicatenibactera numeric vector
Genus.Christensenellaceae_R.7_groupa numeric vector
Genus.Roseburiaa numeric vector
Genus.Prevotellaceae_unclassifieda numeric vector
Genus.Lachnospiraceae_NK4A136_groupa numeric vector
Genus.Doreaa numeric vector
Genus.Klebsiellaa numeric vector
Genus.Prevotella_1a numeric vector
Genus.Succinivibrioa numeric vector
Genus.Blautiaa numeric vector
Genus.Rhodospirillaceae_unclassa numeric vector
Genus.Ruminobactera numeric vector
Genus.Parabacteroidesa numeric vector
Genus.Ruminococcus_2a numeric vector
Genus.Ruminococcaceae_UCG.002a numeric vector
Genus.Enterobacteriaceae_unclassifieda numeric vector
Genus.Ruminococcaceae_UCG.013a numeric vector
Genus.Ruminococcaceae_UCG.005a numeric vector
Genus.Dialistera numeric vector
Genus.Saccharibacteria_gea numeric vector
Genus.Ruminococcaceae_UCG.014a numeric vector
Genus.Ruminococcus_1a numeric vector
Genus.Lachnoclostridiuma numeric vector
Genus.Treponema_2a numeric vector
Genus.Odoribactera numeric vector
Genus.Lachnospiraa numeric vector
Genus.Bilophilaa numeric vector
Genus.Butyrivibrioa numeric vector
Genus.Lachnospiraceae_UCG.004a numeric vector
Genus.Parasutterellaa numeric vector
Genus.Prevotellaceae_unclassa numeric vector
Genus.Sellimonasa numeric vector
Genus.Alloprevotellaa numeric vector
Genus.Lachnospiraceae_unclassifieda numeric vector
Genus.Clostridiales_vadinBB60_group_gea numeric vector
Genus.Peptostreptococcaceae_unclassifieda numeric vector
Genus.Lachnospiraceae_UCG.003a numeric vector
Genus.Sutterellaa numeric vector
Genus.Coprococcus_3a numeric vector
Genus.Ruminococcaceae_unclassa numeric vector
Genus.Porphyromonadaceae_unclassa numeric vector
Genus.Enterobactera numeric vector
Genus.Prevotellaceae_NK3B31_groupa numeric vector
Genus.Lactobacillusa numeric vector
Genus.Weissellaa numeric vector
Genus.Coprobactera numeric vector
Genus.Lachnospiraceae_NK3A20_groupa numeric vector
Genus.Prevotella_7a numeric vector
Genus.Ruminococcaceae_gea numeric vector
Genus.Sarcinaa numeric vector
Genus.Anaerostipesa numeric vector
Genus.Clostridiales_unclassifieda numeric vector
Genus.NB1.n_gea numeric vector
Genus.Lachnospiraceae_ND3007_groupa numeric vector
Genus.Ruminiclostridium_6a numeric vector
Genus.Ruminococcaceae_unclassifieda numeric vector
Genus.Ruminococcaceae_UCG.003a numeric vector
Genus.Desulfovibrioa numeric vector
Genus.Butyricimonasa numeric vector
Genus.Lachnospiraceae_unclassa numeric vector
Genus.Flavonifractora numeric vector
Genus.Coprococcus_1a numeric vector
Family.Prevotellaceaea numeric vector
Family.Ruminococcaceaea numeric vector
Family.Bacteroidaceaea numeric vector
Family.Bifidobacteriaceaea numeric vector
Family.Lachnospiraceaea numeric vector
Family.Enterobacteriaceaea numeric vector
Family.Streptococcaceaea numeric vector
Family.Porphyromonadaceaea numeric vector
Family.Pasteurellaceaea numeric vector
Family.Clostridiaceae_1a numeric vector
Family.Rikenellaceaea numeric vector
Family.Christensenellaceaea numeric vector
Family.Succinivibrionaceaea numeric vector
Family.Rhodospirillaceaea numeric vector
Family.Veillonellaceaea numeric vector
Family.Saccharibacteria_faa numeric vector
Family.Spirochaetaceaea numeric vector
Family.Desulfovibrionaceaea numeric vector
Family.Alcaligenaceaea numeric vector
Family.Clostridiales_vadinBB60_groupa numeric vector
Family.Peptostreptococcaceaea numeric vector
Family.Lactobacillaceaea numeric vector
Family.Leuconostocaceaea numeric vector
Family.Clostridiales_unclassifieda numeric vector
Family.NB1.n_faa numeric vector
Order.Bacteroidalesa numeric vector
Order.Clostridialesa numeric vector
Order.Bifidobacterialesa numeric vector
Order.Enterobacterialesa numeric vector
Order.Lactobacillalesa numeric vector
Order.Pasteurellalesa numeric vector
Order.Aeromonadalesa numeric vector
Order.Rhodospirillalesa numeric vector
Order.Selenomonadalesa numeric vector
Order.Saccharibacteria_ora numeric vector
Order.Spirochaetalesa numeric vector
Order.Desulfovibrionalesa numeric vector
Order.Burkholderialesa numeric vector
Order.NB1.na numeric vector
Class.Bacteroidiaa numeric vector
Class.Clostridiaa numeric vector
Class.Actinobacteriaa numeric vector
Class.Gammaproteobacteriaa numeric vector
Class.Bacillia numeric vector
Class.Alphaproteobacteriaa numeric vector
Class.Negativicutesa numeric vector
Class.Saccharibacteria_cla numeric vector
Class.Spirochaetesa numeric vector
Class.Deltaproteobacteriaa numeric vector
Class.Betaproteobacteriaa numeric vector
Class.Mollicutesa numeric vector
Phylum.Bacteroidetesa numeric vector
Phylum.Firmicutesa numeric vector
Phylum.Actinobacteriaa numeric vector
Phylum.Proteobacteriaa numeric vector
Phylum.Saccharibacteriaa numeric vector
Phylum.Spirochaetaea numeric vector
Phylum.Tenericutesa numeric vector
Examples
1
2
LyonsZhang/ProgPerm documentation built on July 16, 2020, 12:45 a.m.
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Usage
1 | data("testdata1")
|
Format
A data frame with 29 observations on the following 268 variables.
variablea factor with levels
AfricaEuropeSpecies.Prevotella_copria numeric vector
Species.Faecalibacterium_prausnitziia numeric vector
Species.Bacteroides_doreia numeric vector
Species.Bifidobacterium_unclassifieda numeric vector
Species.Bacteroides_unclassifieda numeric vector
Species.Eubacterium_rectalea numeric vector
Species.Prevotella_stercoreaa numeric vector
Species.Shigella_flexneria numeric vector
Species.Gemmiger_formicilisa numeric vector
Species.Bacteroides_vulgatusa numeric vector
Species.Streptococcus_unclassifieda numeric vector
Species.Bifidobacterium_longuma numeric vector
Species.Escherichia.Shigella_unclassifieda numeric vector
Species.Bifidobacterium_pseudocatenulatuma numeric vector
Species.Streptococcus_thermophilusa numeric vector
Species.Barnesiella_intestinihominisa numeric vector
Species.Lachnospiraceae_ge_unclassifieda numeric vector
Species.Haemophilus_parainfluenzaea numeric vector
Species.Bifidobacterium_adolescentisa numeric vector
Species.Clostridium_sensu_stricto_1_unclassifieda numeric vector
Species.Alistipes_onderdonkiia numeric vector
Species.Subdoligranulum_unclassa numeric vector
Species.Fusicatenibacter_saccharivoransa numeric vector
Species.Bacteroides_intestinalisa numeric vector
Species.Alistipes_unclassifieda numeric vector
Species.Ruminococcus_faecisa numeric vector
Species.Christensenellaceae_R.7_group_unclassa numeric vector
Species.Roseburia_intestinalisa numeric vector
Species.Prevotellaceae_unclassifieda numeric vector
Species.Alistipes_putredinisa numeric vector
Species.Subdoligranulum_unclassifieda numeric vector
Species.Lachnospiraceae_NK4A136_group_unclassa numeric vector
Species.Dorea_formicigeneransa numeric vector
Species..Ruminococcus._gnavusa numeric vector
Species.Klebsiella_pneumoniaea numeric vector
Species.Roseburia_unclassifieda numeric vector
Species.Prevotella_1_unclassifieda numeric vector
Species.Succinivibrio_unclassa numeric vector
Species.Roseburia_faecisa numeric vector
Species.Blautia_unclassa numeric vector
Species.Rhodospirillaceae_unclassa numeric vector
Species.Prevotella_9_unclassa numeric vector
Species.Bacteroides_fragilisa numeric vector
Species.Ruminobacter_unclassa numeric vector
Species.Parabacteroides_distasonisa numeric vector
Species.Ruminococcus_2_unclassa numeric vector
Species.Ruminococcaceae_UCG.002_unclassa numeric vector
Species.Enterobacteriaceae_unclassifieda numeric vector
Species.Ruminococcaceae_UCG.013_unclassa numeric vector
Species.Ruminococcaceae_UCG.005_unclassa numeric vector
Species.Dialister_succinatiphilusa numeric vector
Species.Bacteroides_thetaiotaomicrona numeric vector
Species.Bacteroides_unclassa numeric vector
Species.Saccharibacteria_ge_unclassa numeric vector
Species.Blautia_lutia numeric vector
Species.Bacteroides_ovatusa numeric vector
Species.Ruminococcaceae_UCG.014_unclassa numeric vector
Species.Ruminococcus_1_unclassa numeric vector
Species.Lachnoclostridium_unclassa numeric vector
Species.Dorea_unclassifieda numeric vector
Species.Dialister_invisusa numeric vector
Species.Bacteroides_caccaea numeric vector
Species.Roseburia_inulinivoransa numeric vector
Species.Bifidobacterium_bifiduma numeric vector
Species.Bifidobacterium_brevea numeric vector
Species.Prevotella_1_unclassa numeric vector
Species.Treponema_2_unclassifieda numeric vector
Species.Odoribacter_splanchnicusa numeric vector
Species.Ruminococcus_lactarisa numeric vector
Species.Alistipes_finegoldiia numeric vector
Species.Lactobacillus_rogosaea numeric vector
Species.Blautia_unclassifieda numeric vector
Species.Bilophila_unclassa numeric vector
Species.Alistipes_ihumiia numeric vector
Species.Parabacteroides_johnsoniia numeric vector
Species.Butyrivibrio_crossotusa numeric vector
Species.Bacteroides_xylanisolvensa numeric vector
Species.Lachnospiraceae_UCG.004_unclassa numeric vector
Species.Clostridium_saudiia numeric vector
Species.Parasutterella_excrementihominisa numeric vector
Species.Prevotellaceae_unclassa numeric vector
Species.Drancourtella_massiliensisa numeric vector
Species.Clostridium_perfringensa numeric vector
Species.Parabacteroides_merdaea numeric vector
Species.Alloprevotella_unclassa numeric vector
Species.Lachnospiraceae_unclassifieda numeric vector
Species.Clostridiales_vadinBB60_group_ge_unclassa numeric vector
Species.Treponema_2_unclassa numeric vector
Species.Blautia_wexleraea numeric vector
Species.Ruminococcus_2_unclassifieda numeric vector
Species.Peptostreptococcaceae_unclassifieda numeric vector
Species.Lachnospiraceae_UCG.003_unclassa numeric vector
Species.Sutterella_wadsworthensisa numeric vector
Species.Coprococcus_comesa numeric vector
Species.Ruminococcaceae_unclassa numeric vector
Species.Alistipes_obesia numeric vector
Species.Porphyromonadaceae_unclassa numeric vector
Species.Enterobacter_cloacaea numeric vector
Species.Prevotellaceae_NK3B31_group_unclassa numeric vector
Species..Ruminococcus._obeuma numeric vector
Species.Lactobacillus_unclassifieda numeric vector
Species.Weissella_confusaa numeric vector
Species.Faecalibacterium_unclassifieda numeric vector
Species.Lactobacillus_fermentuma numeric vector
Species.Roseburia_unclassa numeric vector
Species.Coprobacter_fastidiosusa numeric vector
Species.Lachnospiraceae_ge_unclassa numeric vector
Species.Ruminococcus_callidusa numeric vector
Species.Lachnospiraceae_NK3A20_group_unclassa numeric vector
Species.Prevotella_7_unclassa numeric vector
Species.Prevotella_9_unclassifieda numeric vector
Species.Ruminococcaceae_ge_unclassa numeric vector
Species.Alistipes_shahiia numeric vector
Species.Lachnospira_pectinoschizaa numeric vector
Species.Sarcina_unclassifieda numeric vector
Species.Anaerostipes_hadrusa numeric vector
Species.Lactobacillus_ruminisa numeric vector
Species.Gabonia_massiliensisa numeric vector
Species..Ruminococcus._torquesa numeric vector
Species.Clostridiales_unclassifieda numeric vector
Species.Prevotella_2_unclassifieda numeric vector
Species.Dorea_unclassa numeric vector
Species.NB1.n_ge_unclassa numeric vector
Species.Lachnospiraceae_ND3007_group_unclassa numeric vector
Species..Eubacterium._siraeuma numeric vector
Species.Ruminococcaceae_unclassifieda numeric vector
Species.Alistipes_unclassa numeric vector
Species.Ruminococcaceae_UCG.003_unclassa numeric vector
Species..Eubacterium._eligensa numeric vector
Species.Desulfovibrio_unclassa numeric vector
Species.Lachnospiraceae_unclassa numeric vector
Species.Flavonifractor_plautiia numeric vector
Species.Butyricimonas_virosaa numeric vector
Species.Coprococcus_1_unclassa numeric vector
Genus.Prevotella_9a numeric vector
Genus.Faecalibacteriuma numeric vector
Genus.Bacteroidesa numeric vector
Genus.Bifidobacteriuma numeric vector
Genus.Lachnospiraceae_gea numeric vector
Genus.Prevotella_2a numeric vector
Genus.Escherichia.Shigellaa numeric vector
Genus.Subdoligranuluma numeric vector
Genus.Streptococcusa numeric vector
Genus.Barnesiellaa numeric vector
Genus.Haemophilusa numeric vector
Genus.Clostridium_sensu_stricto_1a numeric vector
Genus.Alistipesa numeric vector
Genus.Fusicatenibactera numeric vector
Genus.Christensenellaceae_R.7_groupa numeric vector
Genus.Roseburiaa numeric vector
Genus.Prevotellaceae_unclassifieda numeric vector
Genus.Lachnospiraceae_NK4A136_groupa numeric vector
Genus.Doreaa numeric vector
Genus.Klebsiellaa numeric vector
Genus.Prevotella_1a numeric vector
Genus.Succinivibrioa numeric vector
Genus.Blautiaa numeric vector
Genus.Rhodospirillaceae_unclassa numeric vector
Genus.Ruminobactera numeric vector
Genus.Parabacteroidesa numeric vector
Genus.Ruminococcus_2a numeric vector
Genus.Ruminococcaceae_UCG.002a numeric vector
Genus.Enterobacteriaceae_unclassifieda numeric vector
Genus.Ruminococcaceae_UCG.013a numeric vector
Genus.Ruminococcaceae_UCG.005a numeric vector
Genus.Dialistera numeric vector
Genus.Saccharibacteria_gea numeric vector
Genus.Ruminococcaceae_UCG.014a numeric vector
Genus.Ruminococcus_1a numeric vector
Genus.Lachnoclostridiuma numeric vector
Genus.Treponema_2a numeric vector
Genus.Odoribactera numeric vector
Genus.Lachnospiraa numeric vector
Genus.Bilophilaa numeric vector
Genus.Butyrivibrioa numeric vector
Genus.Lachnospiraceae_UCG.004a numeric vector
Genus.Parasutterellaa numeric vector
Genus.Prevotellaceae_unclassa numeric vector
Genus.Sellimonasa numeric vector
Genus.Alloprevotellaa numeric vector
Genus.Lachnospiraceae_unclassifieda numeric vector
Genus.Clostridiales_vadinBB60_group_gea numeric vector
Genus.Peptostreptococcaceae_unclassifieda numeric vector
Genus.Lachnospiraceae_UCG.003a numeric vector
Genus.Sutterellaa numeric vector
Genus.Coprococcus_3a numeric vector
Genus.Ruminococcaceae_unclassa numeric vector
Genus.Porphyromonadaceae_unclassa numeric vector
Genus.Enterobactera numeric vector
Genus.Prevotellaceae_NK3B31_groupa numeric vector
Genus.Lactobacillusa numeric vector
Genus.Weissellaa numeric vector
Genus.Coprobactera numeric vector
Genus.Lachnospiraceae_NK3A20_groupa numeric vector
Genus.Prevotella_7a numeric vector
Genus.Ruminococcaceae_gea numeric vector
Genus.Sarcinaa numeric vector
Genus.Anaerostipesa numeric vector
Genus.Clostridiales_unclassifieda numeric vector
Genus.NB1.n_gea numeric vector
Genus.Lachnospiraceae_ND3007_groupa numeric vector
Genus.Ruminiclostridium_6a numeric vector
Genus.Ruminococcaceae_unclassifieda numeric vector
Genus.Ruminococcaceae_UCG.003a numeric vector
Genus.Desulfovibrioa numeric vector
Genus.Butyricimonasa numeric vector
Genus.Lachnospiraceae_unclassa numeric vector
Genus.Flavonifractora numeric vector
Genus.Coprococcus_1a numeric vector
Family.Prevotellaceaea numeric vector
Family.Ruminococcaceaea numeric vector
Family.Bacteroidaceaea numeric vector
Family.Bifidobacteriaceaea numeric vector
Family.Lachnospiraceaea numeric vector
Family.Enterobacteriaceaea numeric vector
Family.Streptococcaceaea numeric vector
Family.Porphyromonadaceaea numeric vector
Family.Pasteurellaceaea numeric vector
Family.Clostridiaceae_1a numeric vector
Family.Rikenellaceaea numeric vector
Family.Christensenellaceaea numeric vector
Family.Succinivibrionaceaea numeric vector
Family.Rhodospirillaceaea numeric vector
Family.Veillonellaceaea numeric vector
Family.Saccharibacteria_faa numeric vector
Family.Spirochaetaceaea numeric vector
Family.Desulfovibrionaceaea numeric vector
Family.Alcaligenaceaea numeric vector
Family.Clostridiales_vadinBB60_groupa numeric vector
Family.Peptostreptococcaceaea numeric vector
Family.Lactobacillaceaea numeric vector
Family.Leuconostocaceaea numeric vector
Family.Clostridiales_unclassifieda numeric vector
Family.NB1.n_faa numeric vector
Order.Bacteroidalesa numeric vector
Order.Clostridialesa numeric vector
Order.Bifidobacterialesa numeric vector
Order.Enterobacterialesa numeric vector
Order.Lactobacillalesa numeric vector
Order.Pasteurellalesa numeric vector
Order.Aeromonadalesa numeric vector
Order.Rhodospirillalesa numeric vector
Order.Selenomonadalesa numeric vector
Order.Saccharibacteria_ora numeric vector
Order.Spirochaetalesa numeric vector
Order.Desulfovibrionalesa numeric vector
Order.Burkholderialesa numeric vector
Order.NB1.na numeric vector
Class.Bacteroidiaa numeric vector
Class.Clostridiaa numeric vector
Class.Actinobacteriaa numeric vector
Class.Gammaproteobacteriaa numeric vector
Class.Bacillia numeric vector
Class.Alphaproteobacteriaa numeric vector
Class.Negativicutesa numeric vector
Class.Saccharibacteria_cla numeric vector
Class.Spirochaetesa numeric vector
Class.Deltaproteobacteriaa numeric vector
Class.Betaproteobacteriaa numeric vector
Class.Mollicutesa numeric vector
Phylum.Bacteroidetesa numeric vector
Phylum.Firmicutesa numeric vector
Phylum.Actinobacteriaa numeric vector
Phylum.Proteobacteriaa numeric vector
Phylum.Saccharibacteriaa numeric vector
Phylum.Spirochaetaea numeric vector
Phylum.Tenericutesa numeric vector
Examples
1 2 |
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