R/saveRunSettings.R

In MRCIEU/GLU: Derives Summary Variables from Continuous Glucose Monitoring (CGM) data

# The MIT License (MIT)
# Copyright (c) 2018 Louise AC Millard, MRC Integrative Epidemiology Unit, University of Bristol
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# The above copyright notice and this permission notice shall be included in all copies or substantial portions
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# save arguments supplied to GLU by the user, for reporting in publications
saveRunSettings <- function(runSettings) {

	sink(paste0(runSettings@outdir, '/run-settings.txt'))

	print(paste0('indir: ', runSettings@indir))
	print(paste0('outdir: ', runSettings@outdir))
	print(paste0('device: ', runSettings@device))
	print(paste0('daystart: ', runSettings@daystart))
	print(paste0('nightstart: ', runSettings@nightstart))
	print(paste0('timeformat: ', runSettings@timeformat))
	print(paste0('imputeApproximal: ', runSettings@imputeApproximal))
	print(paste0('imputeOther: ', runSettings@imputeOther))
	print(paste0('freq: ', runSettings@freq))
	print(paste0('outlierthreshold: ', runSettings@outlierthreshold))
	print(paste0('hypothreshold: ', runSettings@hypothreshold))
	print(paste0('hyperthreshold: ', runSettings@hyperthreshold))
	print(paste0('save: ', runSettings@save))
	print(paste0('pregnancy: ', runSettings@pregnancy))
	print(paste0('diabetes: ', runSettings@diabetes))
	print(paste0('mgdl: ', runSettings@mgdl))

	sink()

}