plot.BGCR: Visualizing the BGCR results on the phylogenetic tree

Description Usage Arguments

View source: R/BGCR.R

Description

This function plots the BGCR results on the phylogenetic tree.

Usage

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## S3 method for class 'BGCR'
plot(x, BF = FALSE, ind = FALSE, cex = 0.3,
  main = "PMAP", legend = TRUE, ...)

Arguments

x

a BGCR object returned by the "BGCR" function.

BF

logicals. If true, the bayes factors are plotted at each internal node.

ind

logicals. If true, plot the PMAPs under BCR, the model without the graphical structure.

cex

a positive value controls the size of the node label.

main

a string contains the title of the plot.

legend

logicals. If true, plot the legend.

...

further arguments to be passed to plot or to plot.BGCR.


MaStatLab/BGCR documentation built on Nov. 25, 2019, 8:18 a.m.