openLPJOutputFile: Open an LPJ-GUESS .out file
In MagicForrest/DGVMTools: DGVM Processing, Analysis and Plotting Tools

openLPJOutputFile

R Documentation

Open an LPJ-GUESS .out file

Description

openLPJOutputFile returns a data.table object given a string defining a vegetation quantity from the run (eg. "lai", to read the file "lai.out") or a Quantity object, and a Source object which defines where the run is on disk.

Usage

openLPJOutputFile(
  run,
  quant,
  layers = NULL,
  target.sta,
  file.name = file.name,
  verbose = FALSE,
  data.table.only = FALSE,
  ...
)

Arguments

`run`	A `Source` containing the meta-data about the LPJ-GUESS run
`quant`	A Quant to define what output file from the LPJ-GUESS run to open,
`layers`	A character string (or a vector of character strings) specifying which layer columns are to be read. NULL (default) means read all. can also be a simple string defining the LPJ-GUESS output file if the `return.data.table` argument is TRUE
`target.sta`	An STAInfo object describing the target STA
`file.name`	Character string holding the name of the file. This can be left blank, in which case the file name is just taken to be "<quant@id>.out" (also "<quant@id>.out.gz")
`verbose`	A logical, set to true to give progress/debug information
`data.table.only`	A logical, if TRUE return a data.table and not a Field