parse_homer: Parse de-novo motifs from Homer

Description Usage Arguments Details Value Author(s) See Also

Description

Parse de-novo motifs from a Homer analysis from output_dir. Should not normally be called by the user.

Usage

1
parse_homer(output_dir = tempdir())

Arguments

output_dir

Path to output dir for Homer analysis. Defaults to tempdir()

Details

Parses from the "homerResults/" folder and "homerMotifs.all.motifs" file of a Homer analysis and merges the results.

Value

A list containing a dataframe of de-novo motif results and a list of corresponding PWMs.

Author(s)

Malte Thodberg

See Also

call_homer tempdir


MalteThodberg/homeR documentation built on May 7, 2019, 2:09 p.m.