getStuttersAllele2Pos: getStuttersAllele2Pos

In Mariamsp/brackconv: What the Package Does (One Line, Title Case)

getStuttersAllele2Pos

Description

Help function for obtaining Allele 2 sequences in n-1 position

Usage

getStuttersAllele2Pos(df1, df_ext, Hb_min, Hb_max)

Arguments

df1	Input data frame with pairs of parental and stutter sequences
df_ext	Input data frame with all parental and stutter sequences
Hb_min	Minimum Hb value
Hb_max	Maximum Hb value

Details

Identifies Allele 2 sequences in n-1 position when Hb is < 0.3 and removes them from stutter table

Value

Three data frames: 1) Data frames with stutter sequences that need to be removed 2) New stutter table with removed sequences 3) Input data frame with all parental and stutter sequences and new column with Allele2_type variable

Author(s)

Maria Martin Agudo <maagud.at.ous-hf.no>

Mariamsp/brackconv documentation built on March 17, 2022, 5:14 p.m.