RASampleMetadata: Sample metadata from the Argelaguet et al. multiome atlas

In MarioniLab/MouseGastrulationData: Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

Sample metadata from the Argelaguet et al. multiome atlas

Description

A data frame containing stage and genotype information for the multiome atlas dataset.

Usage

RASampleMetadata

Format

A data frame containing information for each 10x sample of the embryo atlas. This object contains:

sample:

Integer, 10x sample index.

sample_name:

Character, sample name provided by authors.

stage:

Character, developmental stage from which sample was generated.

ncells:

Integer, number of cells (post-QC) per sample.

genotype:

Character, T_KO if brachyury knockout sample, otherwise WT.

References

Pijuan-Sala B, Griffiths JA, Guibentif C et al. (2019). A single-cell molecular map of mouse gastrulation and early organogenesis. Nature 566, 7745:490-495.

Examples

head(RASampleMetadata)

MarioniLab/MouseGastrulationData documentation built on Jan. 31, 2024, 11:01 a.m.