plotNhoodGroups: Plot graph of neighbourhoods coloring by nhoodGroups
In MarioniLab/miloR: Differential neighbourhood abundance testing on a graph
plotNhoodGroups R Documentation
Plot graph of neighbourhoods coloring by nhoodGroups
Description
Visualize grouping of neighbourhoods obtained with groupNhoods
Usage
plotNhoodGroups(x, milo_res, show_groups = NULL, ...)
Arguments
x
A Milo object
milo_res
a data.frame of milo results containing the nhoodGroup column
show_groups
a character vector indicating which groups to plot
all other neighbourhoods will be gray
...
arguments to pass to plotNhoodGraph
Value
a ggplot object
Author(s)
Emma Dann
Examples
NULL
MarioniLab/miloR documentation built on Oct. 18, 2024, 6:04 p.m.
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| plotNhoodGroups | R Documentation |
Plot graph of neighbourhoods coloring by nhoodGroups
Description
Visualize grouping of neighbourhoods obtained with groupNhoods
Usage
plotNhoodGroups(x, milo_res, show_groups = NULL, ...)
Arguments
x |
A |
milo_res |
a data.frame of milo results containing the |
show_groups |
a character vector indicating which groups to plot all other neighbourhoods will be gray |
... |
arguments to pass to |
Value
a ggplot object
Author(s)
Emma Dann
Examples
NULL
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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