hclust_plot_wrap: hclust plot wrapper

Description Usage Arguments Value

View source: R/plot_wrappers.R

Description

hclust plot wrapper

Usage

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hclust_plot_wrap(
  count_set = NULL,
  norm_method = "housekeeping_scaled",
  title = NA,
  legend = TRUE,
  colors = NA
)

Arguments

count_set

A count_set of mRNA or miRNA counts generated using count_set

norm_method

Name of the count_set assay to be plotted. Options are "counts", "background_corrected","positive_control_scaled", "housekeeping_scaled", "geNorm", "all_endogenous_scaled", "loess", "vsn", "quantile", "ruvIII". Default = "housekeeping_scaled"

title

Plot title

legend

Option for plot legend. Default = TRUE

colors

Option to define colour scheme. Default = NA

Value

hclust plots


MarthaCooper/NanoStringClustR documentation built on June 25, 2021, 9:41 p.m.