RunLiger: RunLiger

In MartinLoza/RNAseqAnalysis: RNAseqAnalysis

RunLiger

Description

RunLiger

Usage

RunLiger(
  object = NULL,
  batch = "batch",
  k = 30,
  runningTime = FALSE,
  verbose = FALSE,
  ...
)

Arguments

object	A seurat object to correct batch effects.
batch	Batch labels.
k	Inner dimension of factorization (number of factors)
runningTime	Return the running time.
verbose	Print verbose.
...	Arguments passed to other methods.

Value

Seurat object with the corrected data in the 'Liger' reduction.

MartinLoza/RNAseqAnalysis documentation built on March 18, 2022, 2:13 a.m.