In MarzyUnicz/MMRFBiolinksX:

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

MMRFBiolinks is an extension of TCGAbiolinks package for searching, downloading and preparing data from the Multiple Myeloma Research Foundation (MMRF) CoMMpass study available at the NCI's Genomic Data Commons (GDC) Data Portal.

Citation

If you use MMRFBiolinks, please cite:

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Installation

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devtools::install_github("MarzyUnicz/MMRFBiolinksX", build_vignettes = TRUE)
library(MMRFBiolinksX)

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Browse Vignettes

devtools::load_all(".")
browseVignettes("MMRFBiolinksX")

Question and issues

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Please use Github issues if you want to file bug reports or feature requests

Required libraries

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The examples in this tutorial use the following libraries:

library(TCGAbiolinks)
library(SummarizedExperiment)
library(dplyr)
library(DT)

Session info

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version
packageVersion("MMRFBiolinksX")

MarzyUnicz/MMRFBiolinksX documentation built on April 7, 2020, 1:05 p.m.