MaxLev/CloseEnough: Analyze trajectories within a cellular context

This package uses two-dimensional particle trajectories to identify non-random association and putative interaction between cellular structures. It calculates the nearest distance between each point of a trajectory and surrounding structures reprensented as thresholded binary images taken from a corresponding sequence of reference images. It can also be used to randomize the trajectories within a pre-defined area. Randomization is used to determine whether the position of particles relative to other cellular structures is stochastic.

Getting started

Package details

AuthorMaxence Le Vasseur
MaintainerMaxence Le Vasseur <[email protected]>
LicenseGPL-2
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("MaxLev/CloseEnough")
MaxLev/CloseEnough documentation built on May 9, 2019, 2:19 a.m.