scr_fig4: Figure 4

In McCannLab/spatial_fingerprints: Research compendium

Description

Code to reproduce figure 4.

Usage

scr_fig4(
  path = "output/res_lda_nb/nbio/non_pca",
  file_ml = "output/res_f/res_combn_ml_nbio.rds",
  files_pca = c("output/res_f/nbio_pca_lda_01.rds", "output/res_f/nbio_pca_nb_01.rds",
    "output/res_f/ml_nbio_pca.rds")
)

Arguments

path	Path to results files for LDA and NBC.
file_ml	Path to results file (a rds file) for MLP.
files_pca	A vector of 3 rds files (1 per method) corresponding to the results obtained once a PCA was applied to the data set.

McCannLab/spatial_fingerprints documentation built on March 13, 2021, 12:02 a.m.