MSstatsPrepareForGroupComparison: Prepare output for dataProcess for group comparison

View source: R/groupComparison.R

MSstatsPrepareForGroupComparisonR Documentation

Prepare output for dataProcess for group comparison

Description

Prepare output for dataProcess for group comparison

Usage

MSstatsPrepareForGroupComparison(summarization_output)

Arguments

summarization_output

output of dataProcess

Value

list of run-level data for each protein in the input. This list has a "has_imputed" attribute that indicates if missing values were imputed in the input dataset.

Examples

QuantData <- dataProcess(SRMRawData, use_log_file = FALSE)
group_comparison_input = MSstatsPrepareForGroupComparison(QuantData)
length(group_comparison_input) # list of length equal to number of proteins
# in protein-level data of QuantData
head(group_comparison_input[[1]])

MeenaChoi/MSstats documentation built on July 13, 2024, 10:59 a.m.