clust-class: clust class

In MengjunWu/TCseq: Time course sequencing data analysis

clust class

Description

clust is a S4 class for storing results of the clustering analysis of time course data.

Details

The clust objects are returned from timeclust and have a show method printing a compact summary of their contents

Slots

Object of clust class contains the following slots:

method

clustering method used

dist

distance metric used

data

a matrix of original or standardized data used in the analysis

centers

a matrix of cluster centers

cluster

an integer vector of length n (the integers are the indices of clusters the data points belong to. For the fuzzy cmeans clustering method, a data point is assigned to the closest cluster to which the data point has highest membership value.

membership

a matrix of membership values of the data points to each clusters

Author(s)

Mengjun Wu

See Also

timeclust, @

MengjunWu/TCseq documentation built on May 15, 2023, 9:47 p.m.