API for MetAnnotate/metannoviz
Process and visualize output from the MetAnnotate pipeline
| Global functions | |
|---|---|
| choose_discrete_colour_scale | Man page Source code |
| collapse | Man page |
| collapse_by_taxon | Man page Source code |
| collapse_metannotate_table_by_taxon | Man page |
| combine_replicates | Man page Source code |
| create_setup_templates | Man page Source code |
| dereplicate | Man page |
| explore | Man page Source code |
| explore_metannotate_data | Man page |
| filter | Man page Man page |
| filter_by_abundance | Man page Source code |
| filter_by_evalue | Man page Source code |
| generate_ggplot | Man page Source code |
| generate_plotting_colours | Man page Source code |
| load | Man page |
| load_metannotate_data | Man page |
| map_naming_information | Man page Source code |
| metannotate_ggplot | Man page |
| metannotate_plotter | Man page |
| metannoviz | Man page |
| metannoviz-package | Man page |
| normalize | Man page Source code |
| normalize_collapsed_metannotate_data | Man page |
| plot | Man page |
| process_plotting_colours | Man page Source code |
| read | Man page |
| read_metannotate_data | Man page Source code |
| subset | Man page |
| subset_normalized_metannotate_data | Man page |
| summarize_total_reads | Man page Source code |
| summarize_total_reads_all_genes | Man page Source code |
| visualize | Man page Source code |
