collapse_by_taxon: Collapses metannotate table to the given taxonomic rank
In MetAnnotate/metannoviz: Process and visualize output from the MetAnnotate pipeline
Description
Usage
Arguments
Value
Description
Collapses metannotate table to the given taxonomic rank
Usage
1
collapse_by_taxon(metannotate_data, taxon = "Family")
Arguments
metannotate_data
Tibble of metannotate data
taxon
Character vector (length 1) giving the taxon name to collapse to
Can be: domain, phylum, class, order, family, genus, species (case insensitive)
Value
Tibble of metannotate data, collapsed with a 'hits' column
MetAnnotate/metannoviz documentation built on Aug. 2, 2020, 3:12 p.m.
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Description Usage Arguments Value
Description
Collapses metannotate table to the given taxonomic rank
Usage
1 | collapse_by_taxon(metannotate_data, taxon = "Family")
|
Arguments
metannotate_data |
Tibble of metannotate data |
taxon |
Character vector (length 1) giving the taxon name to collapse to Can be: domain, phylum, class, order, family, genus, species (case insensitive) |
Value
Tibble of metannotate data, collapsed with a 'hits' column
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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