Michael-L-Miller/CoveRageAnalysis: Detect Focal Gene Amplification and EGFRvIII from Targeted NGS

Converts read coverage from targeted next-generation sequencing data, specifically derived from the Ion Torrent AmpliSeq Cancer Hotspot Panel V2, into z-scores that are then used to identify focal gene amplification and EGFRvIII.

Getting started

Package details

AuthorMichael L. Miller <mmiller0712@icloud.com>
MaintainerMichael L. Miller <mmiller0712@icloud.com>
LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Michael-L-Miller/CoveRageAnalysis documentation built on May 27, 2019, 11:48 p.m.