Files in Microbial-Explicit-Model/MEMC
Microbial Explicit Model Comparison
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.github/workflows/rcmd.yml
.github/workflows/test-coverage.yaml
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/MEMC.R
R/aadoc.R
R/argument_tests.R
R/custom_class_fxns.R
R/data.R
R/fme.R
R/helper.R
R/model_component.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
data-raw/compdata.R
data-raw/example-data-fluxes.csv
data-raw/example-initial-state.csv
data-raw/jz_oldnew.Rmd
data-raw/make_old_new.R
data-raw/memc_params.csv
data-raw/model_configs.R
data-raw/parameters_inital-vals.R
data-raw/prep_example_data.R
data/BAMS_config.rda
data/COMISSION_config.rda
data/CORPSE_config.rda
data/MEMS_config.rda
data/MEND_config.rda
data/MIMCS_config.rda
data/memc_all_configs.rda
data/memc_incubation_andisol.rda
data/memc_incubation_gelisol.rda
data/memc_incubation_mollisol.rda
data/memc_incubation_ultisol.rda
data/memc_initial_state.rda
data/memc_params.rda
legacy/.gitignore
legacy/Cellobiohydrolase.csv
legacy/MEMC_Dec7.Rmd
legacy/Poolsize2.csv
legacy/Ul_POM_LIN.csv
legacy/Ultisol_control.csv
legacy/comparison.R
legacy/def1.csv
legacy/def2.csv
legacy/def3.csv
legacy/def4.csv
legacy/def5.csv
legacy/jz_results.csv
legacy/memc_results.csv
legacy/nutnet.csv
legacy/pKas.csv
legacy/readme.txt
legacy/recreating_MEMC_Dec7.R
legacy/soilph.csv
man/BAMS_config.Rd
man/COMISSION_config.Rd
man/CORPSE_config.Rd
man/MEMS_config.Rd
man/MEND_config.Rd
man/MIMCS_config.Rd
man/configurations.Rd
man/dynamics.Rd
man/fluxes.Rd
man/memc_all_configs.Rd
man/memc_colorPalette.Rd
man/memc_configure.Rd
man/memc_incubation_andisol.Rd
man/memc_incubation_gelisol.Rd
man/memc_incubation_mollisol.Rd
man/memc_incubation_ultisol.Rd
man/memc_initial_state.Rd
man/memc_modfit.Rd
man/memc_params.Rd
man/memc_sensfun.Rd
man/memc_sensrange.Rd
man/memc_solve.Rd
man/memc_update_config.Rd
man/memc_update_params.Rd
man/update_state.Rd
tests/testthat.R
tests/testthat/compdata.csv
tests/testthat/jz_comps/jz_com.csv
tests/testthat/jz_comps/jz_lin.csv
tests/testthat/jz_comps/jz_mend.csv
tests/testthat/jz_comps/jz_toy.csv
tests/testthat/old-new.csv
tests/testthat/old/LIN_jz.csv
tests/testthat/old/TOY_jz.csv
tests/testthat/old/com_jz.csv
tests/testthat/old/mend_jz.csv
tests/testthat/test-argument.R
tests/testthat/test-custom_fxns.R
tests/testthat/test-data.R
tests/testthat/test-fme.R
tests/testthat/test-helper.R
tests/testthat/test-jz.R
tests/testthat/test-model_component.R
tests/testthat/test-old_new.R
vignettes/.gitignore
vignettes/FutureDynamics.png
vignettes/MEMC.Rmd
vignettes/articles/Background.Rmd
vignettes/articles/ChangeParams.Rmd
vignettes/articles/ContributionGuide.Rmd
vignettes/articles/Fit-to-Data.Rmd
vignettes/articles/FutureDynamics.png
vignettes/articles/Install-Build.Rmd
vignettes/articles/Manual.Rmd
vignettes/articles/ModelComparison.Rmd
vignettes/articles/RoadMap.Rmd
vignettes/articles/StyleGuide.Rmd
vignettes/articles/ToyModel.Rmd
vignettes/articles/configs.png
vignettes/articles/pool_structure.png
vignettes/articles/roadmap.png
vignettes/articles/sensLocal.Rmd
vignettes/articles/sensRange.Rmd
vignettes/articles/som_diversity.png
vignettes/configs.png
vignettes/pool_structure.png
vignettes/roadmap.png
vignettes/som_diversity.png
