BAMS_config: The MEMC model configuration for BAMS

BAMS_configR Documentation

The MEMC model configuration for BAMS

Description

The BAMS configuration is based off of Tang et al. 2022. This model uses MM for the DOM uptake, MM for POM decomposition, and LM for MB decay; see dynamics for more details.

Usage

BAMS_config

Format

An object created from memc_configure, containing the following elements.

name

BAMS

table

table of the dynamics used by this model configuration; see dynamics for more details.

params

data table of the model parameters; see memc_params for more details.

state

vector of the initial state values; see memc_initial_state for more details.

References

Robertson et al. 2019

See Also

Other configurations: COMISSION_config, CORPSE_config, MEMS_config, MEND_config, MIMCS_config

Examples

## Use memc_solve to run the simulation using this configuration.
print(BAMS_config)
memc_solve(mod = MEMS_config, time = 1:10)

Microbial-Explicit-Model/MEMC documentation built on April 12, 2025, 12:50 p.m.