dot-collapse_pop: Get a searchable version of the marker levels

In MiguelRodo/faustutils: Additional functions to extract and plot FAUST output

Usage

.collapse_pop(pop, search = FALSE)

Arguments

pop

list or named character vector. If a character vector, then counts of all subsets matching the set of marker levels are plotted. If a list, then each list element must be a character vector. In that case, one boxplot of frequencies is plotted for each element of the list of where the frequency is the sum of all cells that match the population specified. If NULL, then all subsets found are plotted.

search

logical. If TRUE, then square brackets are concatenated around each of the elements in the level strings.

Examples

.collapse_pop(c("CD4" = "-", CD3" = "-"), search = FALSE); .collapse_pop(c("CD4" = "-", CD3" = "-"), search = TRUE)

MiguelRodo/faustutils documentation built on March 26, 2021, 11:50 p.m.