Man pages for MikkoVihtakari/MarineDatabase
Export data to Norwegian Polar Institute's marine database
| coln_search_words | A list of search words used to find column names in Excel... |
| compile_data | Compile data and meta-data to wide format |
| compile_species_data | Compile species data from ice cores |
| confirm_species_list | Confirm species names from the World Register of Marine... |
| convert_abundance | Calculate and convert between abundance values for ice core... |
| convert_dates | Convert Excel dates to consistent date formatting |
| convert_sampling_depths | Convert sampling depths to numeric. |
| ctd_kongsfjord | Example CTD data for Kongsfjorden |
| ctd_rijpfjord | Example CTD data for Rijpfjorden |
| fix_station_names | Match station names against standardized station names for... |
| FS | Convert font sizes measured as points to ggplot font sizes |
| GEAR | Gear types |
| get_file_ext | Get file extension |
| guess_colname | Guess column names from a list of candidates |
| interleave | Interleave vectors into a single vector |
| kongsfjord_watermasses | Water mass definitions for Kongsfjorden |
| logR | Calculate logarithmic response ratio from a long table |
| LS | Convert line sizes measured as points to ggplot line sizes |
| make_spabbr | Make species abbreviations from latin species names |
| make_species_list | Generate a species list containing unique levels from a... |
| merge_zooplankton_data | Merge two ZooplanktonData objects |
| plot.CDOMdata | Plot CDOM data |
| print.CDOMdata | Print 'CDOMdata' objects |
| print.MetaData | Print 'MetaData' objects |
| print.speciesList | Print 'speciesList' objects |
| print.ZooplanktonData | Print 'ZooplanktonData' objects |
| process_cdom_data | Process CDOM data from Excel sheets |
| read_metadata | Read meta-data from Excel sheets to NPI database input format |
| read_zooplankton_data | Read NPI zooplanton data from an Excel sheet |
| rijpfjord_watermasses | Water mass definitions for Rijpfjorden |
| select | Select an element of each vector from a list |
| STATIONS | Standardized station names |
| subset.ZooplanktonData | Subset a ZooplanktonData object |
| summarize_zooplankton_data | Summarize ZooplanktonData species abundances based on... |
| TYPES | Data types |
| warn_vec | Return character vector elements or length depending on... |
| ZOOPL | Standardized zooplankton species names |
