plot.CDOMdata: Plot CDOM data

In MikkoVihtakari/MarineDatabase: Export data to Norwegian Polar Institute's marine database

Description

Plot method for CDOMdata objects.

Usage

## S3 method for class 'CDOMdata'
plot(x, type = "spectra", ...)

Arguments

x	CDOMdata object from process_cdom_data function.
type	Character specifying the type of the plot. Options: "spectra", "models" or "model_fit". See Details
...	Further arguments that do not work.

Details

Three plot types have been implemented:

• "spectra" Plots the absorbtion coefficient of all samples against wavelength. Flags samples that had negative values in the range between 350 and 400 nm.

• "models" Plots exponential decay models fitted using the nls function. See Value in process_cdom_data for details.

• "model_fit" Plots both the absorbition coefficients and fitted nonlinear models.

Note that especially the "model_fit" option might be slow for large datasets.

Author(s)

Mikko Vihtakari

See Also

process_cdom_data

MikkoVihtakari/MarineDatabase documentation built on July 7, 2020, 2:16 a.m.